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Installed software modules on the HPC cluster 'Elwetritsch'

Modul NameVersionsDescription
abaqusry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


2016
2017
2018
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
anaconda2as1/vol/soft7/modulefiles/powerflow/latest'


4.2.0
4.3.1
5.0.1
5.1.0
5.3.0
latest
Anaconda (Python distribution for large-scale data processing, predictive analytics, and scientific computing)
anaconda3as1/vol/soft7/modulefiles/powerflow/latest'


4.2.0
4.3.1
5.0.1
5.1.0
5.3.0
latest
Anaconda (Python distribution for large-scale data processing, predictive analytics, and scientific computing)
ansoftry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


17.0
17.1
17.2
18.0
18.1
18.2
19.0
19.2
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
ansysory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


17.0
17.1
17.2
18.0
18.1
18.2
19.0
19.2
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
avlctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
latest
R2018a
AVL Simulation Suite
binutilsnas1/vol/soft7/modulefiles/powerflow/latest'


2.26
2.27
latest
GNU Binutils (collection of binary tools)
blastory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2011-04-19
latest
BLAS (Basic Linear Algebra Subprograms)
blastory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.2.26
2.2.31+
2.3.0+
2.6.0+
latest
NCBI Blast (Basic Local Alignment Search Tool)
blendery
cnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Blender (3D content creation suite)
boostory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.61
1.62
1.63
latest
boost (C++ source libraries)
bowtiery
pcnas1/vol/soft7/modulefiles/powerflow/latest'


1.1
latest
Bowtie (ultrafast, memory-efficient short read aligner)
bowtie2y
cnas1/vol/soft7/modulefiles/powerflow/latest'


2.2
latest
SOFA (Statistics Open For All)
caffeory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.0-rc3
latest
Caffe (deep learning framework developed with cleanliness, readability, and speed in mind)
cblasory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2011-01-20
latest
CBLAS (C Interface for the Basic Linear Algebra Subprograms)
cgnstory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


3.3.0
latest
cgnslib (CFD General Notation System)
cmakeory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


3.12
3.5
3.6
3.7
latest
cmake (Cross Platform Make)
codeblockss1/vol/soft7/modulefiles/powerflow/latest'


latest
Code::Blocks (The open source, cross platform, free C++ IDE)
comsolry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


4.3a
5.2a
5.3
latest
COMSOL (COMSOL Multiphysics)
cstctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
2016
2017
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
cudnnory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


6.5
6.5-v2
7.0-v4
7.5-v5
8.0-v5
8.0-v7
9.0-v7
9.1-v7
latest
cuDNN (GPU-accelerated library of primitives for deep neural networks)
cutadaptnas1/vol/soft7/modulefiles/powerflow/latest'


latest
cutadapt (trim adapters from high-throughput sequencing reads)
eclipsey
cnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Eclipse IDE for Java EE Developers
edemtory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2017
2.7
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
elsatory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


latest
ELSA (Extended Local Similarity Analysis)
embreery
pcnas1/vol/soft7/modulefiles/powerflow/latest'


2
latest
Embree (collection of high-performance ray tracing kernels)
fastaory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


36
latest
FASTA (Sequence Comparisons)
fastq-pairs1/vol/soft7/modulefiles/powerflow/latest'


latest
fastq-pair (rewrite paired end fastq files)
fastx_toolkitvol/soft7/modulefiles/powerflow/latest'


0.0.14
latest
FASTX-Toolkit (collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing)
ffmpegry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


3.2
3.3
latest
FFmpeg (Multimedia Framework)
freefemy
cnas1/vol/soft7/modulefiles/powerflow/latest'


3
latest
FreeFem++ (partial differential equation solver)
gaussiannas1/vol/soft7/modulefiles/powerflow/latest'


g09-D.01
g16-A.03
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
gccctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
4.9
5.1
5.2
5.3
5.4
5.5
6.1
6.2
6.3
6.4
7.1
7.2
7.3
8.1
latest
GCC (The GNU Compiler Collection)
gitctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
latest
Git (distributed version control system )
gnuploty
cnas1/vol/soft7/modulefiles/powerflow/latest'


5.0
latest
GNU Plot (simple program for displaying phylogenies)
gradlery
pcnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Gradle (Build Tool)
gromacsy
cnas1/vol/soft7/modulefiles/powerflow/latest'


2016
5.0
5.1
latest
GROMACS (Groningen Machine for Chemical Simulations)
gslctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
1.16
latest
GNU Scientific Library
gurobiry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


7.0
7.5
8.0
8.1
latest
Gurobi (State-of-the-Art Löser für mathematische Programme)
hdf5tory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.10
1.8
latest
HDF5 (data model, library, and file format for storing and managing data)
hmmerory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.3
3.1
latest
HMMER (biosequence analysis using profile hidden Markov models)
hpxctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
0.9
latest
HPX (High Performance ParalleX)
hyperworkss1/vol/soft7/modulefiles/powerflow/latest'


2017
latest
Altair HyperWorks CAE Plattform
intelory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2015
2016
2017
2018
2019
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Note: This software is licensed to selected users only.
intellij-ideavol/soft7/modulefiles/powerflow/latest'


latest
IntelliJ IDEA (Java IDE - Community Edition)
interproscan/vol/soft7/modulefiles/powerflow/latest'


5
latest
InterProScan (database which integrates together predictive information about proteins' function from a number of partner resources)
ispctory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.9
latest
ISPC (compiler for a variant of the C programming language)
jagucory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.1
2.1a
2.2-dummy-db
3.0
latest
JAguc (software for identifying large samples of RNA data efficiently)
janssony
cnas1/vol/soft7/modulefiles/powerflow/latest'


2.5
2.6
latest
Jansson (C library for encoding, decoding and manipulating JSON data)
jdkctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
10
11
1.6
1.7
1.8
latest
Java SDK
lammpsry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


2016-02-16
2016-05-14
2017-01-09
latest
LAMMPS (Molecular Dynamics Simulator)
liggghtsnas1/vol/soft7/modulefiles/powerflow/latest'


3.6
ERROR:105: Unable to locate a modulefile for 'liggghts/latest'
lumerical-fdtdol/soft7/modulefiles/powerflow/latest'


8
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Rufen Sie für eine Freischaltung bitte die Webseite https://elwe.rhrk.uni-kl.de/cockpit/ auf. Note: This software is licensed to selected users only. In oder to use this product, please go to https://elwe.rhrk.uni-kl.de/cockpit/. [Restricted Access]
mafftory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


7
latest
MAFFT (Multiple alignment program for amino acid or nucleotide sequences)
mapleory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2016
2017
2018
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert: Siehe http://www.rhrk.uni-kl.de/software/lizenzen/maple/ Note: This software is licensed to selected users only. Go to http://www.rhrk.uni-kl.de/software/lizenzen/maple/
mathematica1/vol/soft7/modulefiles/powerflow/latest'


10
11
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Note: This software is licensed to selected users only.
matlabry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


latest
R2016a
R2016b
R2017a
R2017b
R2018a
R2018b
Diese Software ist nur für ausgewählte Nutzer lizensiert. Note: This software is licensed to selected users only.
maxwelly
cnas1/vol/soft7/modulefiles/powerflow/latest'


3
4
latest
Maxwell Render
metisory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


5.1
latest
METIS (Serial Graph Partitioning and Fill-reducing Matrix Ordering)
mscctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
adams
ERROR:105: Unable to locate a modulefile for 'msc/latest'
musclery
pcnas1/vol/soft7/modulefiles/powerflow/latest'


3.8
latest
Muscle (Multiple sequence alignment)
namdtory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.12-ibverbs
2.12-ibverbs-smp
2.12-ibverbs-smp-cuda
latest
NAMD (Molecular Dynamics Software)
netbeansnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Netbeans Java IDE
nvidiary
pcnas1/vol/soft7/modulefiles/powerflow/latest'


7.5
8.0
9.0
9.1
9.2
latest
NVIDIA CUDA SDK (CUDA Toolkit, GPU Programming SDK)
octavery
pcnas1/vol/soft7/modulefiles/powerflow/latest'


4.0
4.2
latest
GNU Octave (high-level interpreted language for numerical computations)
openblasnas1/vol/soft7/modulefiles/powerflow/latest'


0.2.20
0.2.6
latest
OpenBLAS (optimized BLAS library based on GotoBLAS2 1.13 BSD)
opencvry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


3.4
latest
OpenCV (a library of programming functions for real time computer vision)
opendxry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


4.4
latest
OpenDX (Make your data come to life!)
openfoamnas1/vol/soft7/modulefiles/powerflow/latest'


2.3.1
2.4.0
3.0.1
4.0
4.1
6
latest
v1612+
v1706
v1806
OpenFOAM (Open Source Computational Fluid Dynamics) Extended Version
openmpiy
cnas1/vol/soft7/modulefiles/powerflow/latest'


1.10
1.10-intel-2016
1.10-intel-2017
1.6
1.8
2.0
2.0-intel-2016
2.0-intel-2017
2.1
2.1-intel-2016
2.1-intel-2017
3.0
3.0-intel-2017
3.0-intel-2018
3.1
3.1-intel-2017
3.1-intel-2018
latest
OpenMPI (open source MPI-2 implementation)
orcatory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


4.0
latest
ORCA (An ab initio, DFT and semiempirical SCF-MO package)
ovitoory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.8
latest
Ovito (scientific visualization and analysis software for atomistic simulation data )
pandaseqnas1/vol/soft7/modulefiles/powerflow/latest'


2.11
latest
PANDAseq (PAired-eND Assembler for DNA sequences)
paraviewnas1/vol/soft7/modulefiles/powerflow/latest'


4.3
4.4
5.1
5.2
5.4
5.5
latest
ParaView (data analysis and visualization application)
perltory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


5.14
5.26
latest
Perl Programming Language
pgictory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
15.4
16.4
18.4
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Note: This software is licensed to selected users only.
platform-mpi/vol/soft7/modulefiles/powerflow/latest'


9.1.2-CE
9.1.4
latest
Platform MPI
powerflowas1/vol/soft7/modulefiles/powerflow/latest'

ERROR:105: Unable to locate a modulefile for 'powerflow/latest'
pythonry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


2.7
3.5
3.6
latest
Python Programming Language
qiimeory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.8.0
2018.6
latest
Qiime (Quantitative Insights Into Microbial Ecology)
qtectory
et/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

nd
5.10
5.4
5.5
5.6
5.7
5.8
5.9
latest
Qt (cross-platform application and UI framework)
qtcreatoras1/vol/soft7/modulefiles/powerflow/latest'


latest
Qt Creator (cross-platform application and UI framework)
R:
rectory
net/hpcnas1/vol/soft7/modulefiles/powerflow/latest'
t
und
3.2
3.3
latest
R (programming language and software environment for statistical computing and graphics)
raxmlory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


7.3
8.2
latest
RAxML (Randomized Axelerated Maximum Likelihood)
realflownas1/vol/soft7/modulefiles/powerflow/latest'


2015
latest
RealFlow
rnammery
cnas1/vol/soft7/modulefiles/powerflow/latest'


1.2
latest
RNAmmer (consistent and rapid annotation of ribosomal RNA genes)
rsemtory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.2
latest
RSEM (RNA-Seq by Expectation-Maximization)
rstudioy
cnas1/vol/soft7/modulefiles/powerflow/latest'


1.0
latest
RStudio IDE (free and open source integrated development environment for R)
samtoolsnas1/vol/soft7/modulefiles/powerflow/latest'


1.3
1.8
latest
SAM Tools (Sequence Alignment/Map Tools)
scilabry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Scilab (software for numerical computation)
score-py
cnas1/vol/soft7/modulefiles/powerflow/latest'


3.0
latest
Score-P (Scalable Performance Measurement Infrastructure for Parallel Codes)
seafiley
cnas1/vol/soft7/modulefiles/powerflow/latest'


6
latest
Seafile (Cloud storage with client-side Encryption)
signalpy
cnas1/vol/soft7/modulefiles/powerflow/latest'


4.1
latest
SignalP (discriminating signal peptides from transmembrane regions)
sofatory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


1.4
latest
SOFA (Statistics Open For All)
spadesry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


3.9
latest
SPAdes (simple program for displaying phylogenies)
spsstory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


24
latest
SPSS (IBM SPSS Predictive Analytics)
star-ccm+as1/vol/soft7/modulefiles/powerflow/latest'


11
latest
Star-CCM+ (engineering physics simulation)
subversions1/vol/soft7/modulefiles/powerflow/latest'


latest
Subversion (open source version control system)
symphonynas1/vol/soft7/modulefiles/powerflow/latest'


5.6
latest
Symphony (solver for mixed-integer linear programs - MILPs)
tecploty
cnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Tecplot (Master the View)
texlivey
cnas1/vol/soft7/modulefiles/powerflow/latest'


latest
TeX Live (TeX document production system)
tmhmmory
hpcnas1/vol/soft7/modulefiles/powerflow/latest'


2.0
latest
TMHMM (predicts transmembrane helices in proteins)
tophatry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


2.1
latest
TopHat (fast splice junction mapper for RNA-Seq reads)
totalviewas1/vol/soft7/modulefiles/powerflow/latest'


latest
TotalView (sophisticated and powerful tool used for debugging and analyzing both serial and parallel programs)
transdecoder/vol/soft7/modulefiles/powerflow/latest'


3.0
latest
TransDecoder (Find Coding Regions Within Transcripts)
trinityrnaseqvol/soft7/modulefiles/powerflow/latest'


2.0
2.2
2.3
2.4
latest
Trinity RNA Seq (PAired-eND Assembler for DNA sequences)
trinotateas1/vol/soft7/modulefiles/powerflow/latest'


3.0
latest
Trinotate (Find Coding Regions Within Transcripts)
vampirry
pcnas1/vol/soft7/modulefiles/powerflow/latest'


latest
Vampir (Visualization and Analysis of Parallel Applications)
vasptory
/hpcnas1/vol/soft7/modulefiles/powerflow/latest'


5.4.4
5.4.4-GPU
latest
Diese Software ist nur für ausgewählte Nutzer lizensiert. Note: This software is licensed to selected users only.
vmdctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
1.9
latest
VMD (molecular visualization program)
vtkctory
t/hpcnas1/vol/soft7/modulefiles/powerflow/latest'

d
7.0
latest
VTK (The Visualization Toolkit)
xcrysdennas1/vol/soft7/modulefiles/powerflow/latest'


latest
XCrySDen (crystalline and molecular structure visualisation program)

Additional software can be installed on request.